Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905828.1_cds_XP_016456094.1_49963
CDS Infomation

[gene=LOC107780087] [db_xref=GeneID:107780087] [protein=structural maintenance of chromosomes protein 3-like] [protein_id=XP_016456094.1] [location=complement(join(42787..42971,43066..43240,43680..43772,45320..45466,45569..45737,47036..47187,47256..47326,47404..47587,47668..47859,47939..48090,49527..49676,49761..49848,50234..50461))] [gbkey=CDS]
Sequence

ATGACATCTTCTTTCTGTCTTTGCAGCTTATTCCATGTGGTGGTTGATAATGATGAAACA
TCAACTAAAATTATTAGACACCTCAATGCACAAAAAGGTGGACGAGTTACATTTATTCCA
TTGAACAGGGTTAAGGCTCCACATGTTAATTATCCAAATAGCTCTGATGTGATTCCGCTT
GTGAAGAAATTGACGTTTTCTGATGTATATGAAAAAGCATTTAAGCAGGTGTTTGCAAGA
ACCGTAATTTGTAAAGATCTGGATGTTGCTACCAGGGTTGCTCGTACTGATGGGCTTGAC
TGCATTACTCTTGAAGGTGACCAAGTTAGTAAAAAGGGGGGCATGACCGGTGGATTTTAT
GACTATAGACGCTCAAAATTGAGGTTTATGAGCACCATCAAACAGAATATAGTGTCCATC
AACCTGAAGGAGCGTGAACTTGAGGAAGTTAGATATAAACTTCAAGAGATAGACCAGAAA
ATTAATGAACTTGTGGCTGAGCAGCAGAAAAATGATGCTGCCCTGGCTCATGACAAGTCT
GAGTTAGAACAACTTAAACAAGATATTGGTAATGCTGAAAGACAGAGACAATCCATCTTA
AAAGCTCTTCAAAAGAAGGAGAAACTGCTTGATAATATTTTGAGTCAAATAGATCAGCTA
AGAGCTAGTATAGCTGTGAAACAAGATGAAATGGGAACAGAACTTGTTGATCATTTAACA
CCGGAAGAGCGAGATTCTTTGTCACGCTTGAACCCTGAAATTACGACTCTGAAGGAGAAG
CTGATTGCGTGCAGGGCAAATCGGATAGAGACTGAAACCAGAAAAGAGGAGCTTGAGATG
AATCTGTCAACAAATCTTGAAATACGAAAACAAGAGTTAGTGGCGATGAATTCTTCTGTC
GACGTTGATATGTTACAGGGTGAAGTTGAGAGCAAGAATCAGGAACTTAAGGATGCAGAG
TCACTAGTTGACCATGTGACTGAAGAGCTTACAAGGGTTTCTGGAAGTATAGATGAACGA
AACAAGAGGCTCAAGAAGATTAAACAGGACAAGGATAAGCTGAAGACTCTTGAAGATGAG
TATCAGAATACACTTCAGGATGAAGCAAGAGAATTGGAGCAGCTACTAAGTAAACGGAAC
ACTTGTCTCGCCAAGCAAGAAGAGTACTCGAAGAAAATCCGGGAACTGGGTCCTTTATCT
TCTGATGCCTTTGAGACGTACAAAAGAAGGAATGTAAAAGAATTATACAAGATACTGCAC
AAGTGTAACGAGCAGCTGAAACAATTCAGCCATGTAAACAAAAAAGCACTTGATCAATAT
GTAAATTTCACCGAGCAAAGAGAAGAACTCCAAAGAAGGCAAGCTGAATTAGATGCTGGT
GATGAGAAAATCAAGGAACTTATATCAGTTTTGGATATGAGGAAGGATGAATCAATTGAG
CGCACGTTCAAGGGTGTGGCTAAACATTTCCGTGAAGTATTCTCTCAACTCGTGCAAGGA
GGTCATGGGTTCTTAGTTATGATGAAGAAAAAGGATGGCGAGGACGATGACAATGATCCT
GATGATGATGAGCCTCGTGCTGATATGGAGGGAAGGGTTGAGAAATATATTGGTGTGAAA
GTGAAGGTGTCCTTCACTGGACAAGGAGAAACACAGTCAATGAAACAGTTATCAGGTGGT
CAGAAAACTGTGGTAGCGCTGGCACTTATATTTGCCATACAAAGATGTGATCCTGCCCCA
TTTTATCTTTTTGATGAGATAGATGCAGCACTAGATCCTCAATACAGAACAGCCGTGGGG
AATATGGTTCGTGATTTGGCAGACAGGGGCAGCACACAATTTATTACGACGACATTCCGG
CCGGAGCTTGTGAAAGTGGCTGATAAGATATATGGTGTGATACACAAAAATAGAGTTAGC
CGTGTCAACGTTATCTCCAGGGACGATGCCTTAGATTTTATTGAGCATGATCAATCTCAT
AACTGA

Peptide Sequence

PEP ID

XP_016456094.1
PEP Infomation

PREDICTED: structural maintenance of chromosomes protein 3-like [Nicotiana tabacum]
Sequence

MTSSFCLCSLFHVVVDNDETSTKIIRHLNAQKGGRVTFIPLNRVKAPHVNYPNSSDVIPL
VKKLTFSDVYEKAFKQVFARTVICKDLDVATRVARTDGLDCITLEGDQVSKKGGMTGGFY
DYRRSKLRFMSTIKQNIVSINLKERELEEVRYKLQEIDQKINELVAEQQKNDAALAHDKS
ELEQLKQDIGNAERQRQSILKALQKKEKLLDNILSQIDQLRASIAVKQDEMGTELVDHLT
PEERDSLSRLNPEITTLKEKLIACRANRIETETRKEELEMNLSTNLEIRKQELVAMNSSV
DVDMLQGEVESKNQELKDAESLVDHVTEELTRVSGSIDERNKRLKKIKQDKDKLKTLEDE
YQNTLQDEARELEQLLSKRNTCLAKQEEYSKKIRELGPLSSDAFETYKRRNVKELYKILH
KCNEQLKQFSHVNKKALDQYVNFTEQREELQRRQAELDAGDEKIKELISVLDMRKDESIE
RTFKGVAKHFREVFSQLVQGGHGFLVMMKKKDGEDDDNDPDDDEPRADMEGRVEKYIGVK
VKVSFTGQGETQSMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTAVG
NMVRDLADRGSTQFITTTFRPELVKVADKIYGVIHKNRVSRVNVISRDDALDFIEHDQSH
N

Transcript Sequence

Gene sequence data has not been registered.